[galaxy-announce] May 11, 2012 Galaxy Development News Brief

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[galaxy-announce] May 11, 2012 Galaxy Development News Brief

Jennifer Jackson
Dear Galaxy Community,

The May 11, 2012 Galaxy Distribution has been released at: http://bitbucket.org/galaxy/galaxy-dist/

Complete News Brief


    * EMBOSS tools and datatypes have now moved from the Galaxy distribution  to the Galaxy Main Tool Shed.

    * Tool Integration Tests, Custom Tool Panel Configuration, and Configurable Tool Output Locations.

    * Improved Multiprocess Job Handling and Enhanced OpenID Support.
    * GATK version 1.4, FreeBayes, Updated Megablast using NCBI BLAST+, Trinity, WormBase 2, and IGB external display.

    * Trackster upgrades include strand coloring, interval datatype support, and tabix indexing (fast!!).

    * Updated User Interface, Workflow-API upgrades, and Custom UCSC Display.


new:              % hg clone http://www.bx.psu.edu/hg/galaxy galaxy-dist
upgrade:     % hg pull -u -r 17d57db9a7c0

Thanks for using Galaxy!

Jennifer Jackson
Galaxy Team

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Jennifer Hillman-Jackson
Galaxy Support and Training