7, 2012 Distribution & News Brief
BLAST+ has moved from the Galaxy distribution to
the Galaxy's Main Tool Shed.
Shed is now running Mercurial version 2.2.3.
Many updates and refinements including UI/metadata
changes - read the full report.
local setup with the Reference Genome rsync
Server: same builds and indexes as on the public
Galaxy Main instance.
to Output and Error Handling including
updated documentation and enhancements to exit code
/ Bowtie2 latest support includes Tophat2 fusions
output, Bowtie2 sorted BAMs, and a new RNA-seq Tutorial.
updates include improved support for bigWig
/ bigBed, new support for bedGraph, and a
new search feature for GFF / GTF / BED datasets.
Plus many other
Workflow, API, Source, UI features and a
summary of recent Galaxy Update highlights.
new: $ hg clone
upgrade: $ hg pull -u -r
Thanks for using Galaxy!
Jennifer Jackson & Galaxy Team