[galaxy-announce] Galaxy February 8, 2013 Distribution & News Brief

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[galaxy-announce] Galaxy February 8, 2013 Distribution & News Brief

Jennifer Jackson

Complete News Brief
 

Highlights:
  • Improvements to our release process. Release tag must be used in the hg update command to upgrade. More at usegalaxy.org.

  • Tool Shed Complex repository dependencies are introduced, streamlining core dependency use across individual tools.

  • Also updated in the Tool Shed: multiple repository installation, dependency installation (when defined), and many usability enhancements and fixes.
  • New Bedgraph-to-bigwig tool plus Filter tool updated.

  • Workflows now include option to export an image and the core Framework now allows more unified reference genome usage and access.

  • Ten Community Pull-Requests incorporated, plus another contribution to the tool Shed, addressing general usability, API, tools, error handling, workflows, and more. Thanks!!

  • Review highlights from the latest monthly Galaxy Update newsletter and Galaxy Project Stats!

  • Plus bug fixes and related enhancements for visualizations, histories, workflows, and tools.

http://getgalaxy.org

http://bitbucket.org/galaxy/galaxy-dist

http://galaxy-dist.readthedocs.org
 

new:     $ hg clone http://www.bx.psu.edu/hg/galaxy galaxy-dist

upgrade: $ hg pull 
         $ hg update release_2013.02.08


To ensure that you continue to receive updates about Galaxy Distributions and News Briefs, be sure to subscribe to the Galaxy-Announce mailing list, a low-volume list dedicated to News Items and priority messages from the Galaxy community and project core team.

Thanks for using Galaxy,

The Galaxy Team



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Jennifer Hillman-Jackson
Galaxy Support and Training
http://galaxyproject.org